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This volume consists of papers concerned with models and methods used in solving some fundamental problems of biosciences. They represent a wide spectrum of diverse ideas and trends. In particular, they reflect the genuinely interdisciplinary nature of research on modelling in molecular biology – the inspiration, ideas and techniques presented in this volume come from mathematics, computer science, statistics, chemistry and biology.




This volume consists of papers concerned with models and methods used in solving some fundamental problems of biosciences. They represent a wide spectrum of diverse ideas and trends. In particular, they reflect the genuinely interdisciplinary nature of research on modelling in molecular biology – the inspiration, ideas and techniques presented in this volume come from mathematics, computer science, statistics, chemistry and biology.




This volume consists of papers concerned with models and methods used in solving some fundamental problems of biosciences. They represent a wide spectrum of diverse ideas and trends. In particular, they reflect the genuinely interdisciplinary nature of research on modelling in molecular biology – the inspiration, ideas and techniques presented in this volume come from mathematics, computer science, statistics, chemistry and biology.


Content:
Front Matter....Pages I-X
Stoichiometric Foundation of Large-Scale Biochemical System Analysis....Pages 1-19
Modelling Stochastic Clonal Interference....Pages 21-38
Software Verification of Biomolecular Systems....Pages 39-57
Kinetic Modelling as a Modern Technology to Explore and Modify Living Cells....Pages 59-103
Modelling Gene Assembly in Ciliates....Pages 105-124
Towards Molecular Programming — a Personal Report on DNA8 and Molecular Computing....Pages 125-140
Molecular Information Theory: Solving the Mysteries of DNA....Pages 141-150
Formal Modelling of C. elegans Development. A Scenario-Based Approach....Pages 151-173
P Systems with Symport/Antiport Rules. A Survey....Pages 175-192
Mathematical Modelling of the Immune System....Pages 193-218
The ?-calculus as an Abstraction for Biomolecular Systems....Pages 219-266
The Topology of Evolutionary Biology....Pages 267-286
Models of Genome Evolution....Pages 287-304
Back Matter....Pages 305-305


This volume consists of papers concerned with models and methods used in solving some fundamental problems of biosciences. They represent a wide spectrum of diverse ideas and trends. In particular, they reflect the genuinely interdisciplinary nature of research on modelling in molecular biology – the inspiration, ideas and techniques presented in this volume come from mathematics, computer science, statistics, chemistry and biology.


Content:
Front Matter....Pages I-X
Stoichiometric Foundation of Large-Scale Biochemical System Analysis....Pages 1-19
Modelling Stochastic Clonal Interference....Pages 21-38
Software Verification of Biomolecular Systems....Pages 39-57
Kinetic Modelling as a Modern Technology to Explore and Modify Living Cells....Pages 59-103
Modelling Gene Assembly in Ciliates....Pages 105-124
Towards Molecular Programming — a Personal Report on DNA8 and Molecular Computing....Pages 125-140
Molecular Information Theory: Solving the Mysteries of DNA....Pages 141-150
Formal Modelling of C. elegans Development. A Scenario-Based Approach....Pages 151-173
P Systems with Symport/Antiport Rules. A Survey....Pages 175-192
Mathematical Modelling of the Immune System....Pages 193-218
The ?-calculus as an Abstraction for Biomolecular Systems....Pages 219-266
The Topology of Evolutionary Biology....Pages 267-286
Models of Genome Evolution....Pages 287-304
Back Matter....Pages 305-305
....
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