Ebook: Transactions on Computational Systems Biology XIV: Special Issue on Computational Models for Cell Processes

The LNCS journal Transactions on Computational Systems Biology is devoted to inter- and multidisciplinary research in the fields of computer science and life sciences and supports a paradigmatic shift in the techniques from computer and information science to cope with the new challenges arising from the systems oriented point of view of biological phenomena. This, the 14th Transactions on Computational Systems Biology volume, guest edited by Ion Petre and Erik de Vink, focuses on Computational Models for Cell Processes and features a number of carefully selected and enhanced contributions, initially presented at the CompMod workshop, which took place in Aachen, Germany, in September 2011. The papers, written from different points of view and following various approaches, cover a wide range of topics within the field of modeling and analysis of biological systems. In addition, two regular submissions deal with models of self-assembling systems and metabolic constraints on the evolution of genetic codes.

---

The LNCS journal Transactions on Computational Systems Biology is devoted to inter- and multidisciplinary research in the fields of computer science and life sciences and supports a paradigmatic shift in the techniques from computer and information science to cope with the new challenges arising from the systems oriented point of view of biological phenomena.
This, the 14th Transactions on Computational Systems Biology volume, guest edited by Ion Petre and Erik de Vink, focuses on Computational Models for Cell Processes and features a number of carefully selected and enhanced contributions, initially presented at the CompMod workshop, which took place in Aachen, Germany, in September 2011. The papers, written from different points of view and following various approaches, cover a wide range of topics within the field of modeling and analysis of biological systems. In addition, two regular submissions deal with models of self-assembling systems and metabolic constraints on the evolution of genetic codes.

---

The LNCS journal Transactions on Computational Systems Biology is devoted to inter- and multidisciplinary research in the fields of computer science and life sciences and supports a paradigmatic shift in the techniques from computer and information science to cope with the new challenges arising from the systems oriented point of view of biological phenomena.
This, the 14th Transactions on Computational Systems Biology volume, guest edited by Ion Petre and Erik de Vink, focuses on Computational Models for Cell Processes and features a number of carefully selected and enhanced contributions, initially presented at the CompMod workshop, which took place in Aachen, Germany, in September 2011. The papers, written from different points of view and following various approaches, cover a wide range of topics within the field of modeling and analysis of biological systems. In addition, two regular submissions deal with models of self-assembling systems and metabolic constraints on the evolution of genetic codes.
Content:
Front Matter....Pages -
Trend-Based Analysis of a Population Model of the AKAP Scaffold Protein....Pages 1-25
Quasi Product Form Approximation for Markov Models of Reaction Networks....Pages 26-52
Multiple Verification in Complex Biological Systems: The Bone Remodelling Case Study....Pages 53-76
On Approximative Reachability Analysis of Biochemical Dynamical Systems....Pages 77-101
Minimal Reaction Systems....Pages 102-122
Complex Functional Rates in Rule-Based Languages for Biochemistry....Pages 123-150
Probabilistic Model Checking of the PDGF Signaling Pathway....Pages 151-180
Self-assembly Models of Variable Resolution....Pages 181-203
Metabolic Constraints on the Evolution of Genetic Codes: Did Multiple Preaerobic’ Ecosystem Transitions Entrain Richer Dialects via Serial Endosymbiosis?....Pages 204-232
Back Matter....Pages -

---

The LNCS journal Transactions on Computational Systems Biology is devoted to inter- and multidisciplinary research in the fields of computer science and life sciences and supports a paradigmatic shift in the techniques from computer and information science to cope with the new challenges arising from the systems oriented point of view of biological phenomena.
This, the 14th Transactions on Computational Systems Biology volume, guest edited by Ion Petre and Erik de Vink, focuses on Computational Models for Cell Processes and features a number of carefully selected and enhanced contributions, initially presented at the CompMod workshop, which took place in Aachen, Germany, in September 2011. The papers, written from different points of view and following various approaches, cover a wide range of topics within the field of modeling and analysis of biological systems. In addition, two regular submissions deal with models of self-assembling systems and metabolic constraints on the evolution of genetic codes.
Content:
Front Matter....Pages -
Trend-Based Analysis of a Population Model of the AKAP Scaffold Protein....Pages 1-25
Quasi Product Form Approximation for Markov Models of Reaction Networks....Pages 26-52
Multiple Verification in Complex Biological Systems: The Bone Remodelling Case Study....Pages 53-76
On Approximative Reachability Analysis of Biochemical Dynamical Systems....Pages 77-101
Minimal Reaction Systems....Pages 102-122
Complex Functional Rates in Rule-Based Languages for Biochemistry....Pages 123-150
Probabilistic Model Checking of the PDGF Signaling Pathway....Pages 151-180
Self-assembly Models of Variable Resolution....Pages 181-203
Metabolic Constraints on the Evolution of Genetic Codes: Did Multiple Preaerobic’ Ecosystem Transitions Entrain Richer Dialects via Serial Endosymbiosis?....Pages 204-232
Back Matter....Pages -
....