Ebook: Infectious Disease Informatics and Biosurveillance: Research, Systems and Case Studies

This book on Infectious Disease Informatics (IDI) and biosurveillance is intended to provide an integrated view of the current state of the art, identify technical and policy challenges and opportunities, and promote cross-disciplinary research that takes advantage of novel methodology and what we have learned from innovative applications. This book also fills a systemic gap in the literature by emphasizing informatics driven perspectives (e.g., information system design, data standards, computational aspects of biosurveillance algorithms, and system evaluation). Finally, this book attempts to reach policy makers and practitioners through the clear and effective communication of recent research findings in the context of case studies in IDI and biosurveillance, providing “hands-on” in-depth opportunities to practitioners to increase their understanding of value, applicability, and limitations of technical solutions. This book collects the state of the art research and modern perspectives of distinguished individuals and research groups on cutting-edge IDI technical and policy research and its application in biosurveillance. The contributed chapters are grouped into three units. Unit I provides an overview of recent biosurveillance research while highlighting the relevant legal and policy structures in the context of IDI and biosurveillance ongoing activities. It also identifies IDI data sources while addressing information collection, sharing, and dissemination issues as well as ethical considerations. Unit II contains survey chapters on the types of surveillance methods used to analyze IDI data in the context of public health and bioterrorism. Specific computational techniques covered include: text mining, time series analysis, multiple data streams methods, ensembles of surveillance methods, spatial analysis and visualization, social network analysis, and agent-based simulation. Unit III examines IT and decision support for public health event response and bio-defense. Practical lessons learned in developing public health and biosurveillance systems, technology adoption, and syndromic surveillance for large events are discussed. The goal of this book is to provide an understandable interdisciplinary IDI and biosurveillance reference either used as a standalone textbook or reference for students, researchers, and practitioners in public health, veterinary medicine, biostatistics, information systems, computer science, and public administration and policy. Integrated Series in Information Systems (IS2) strives to publish scholarly work in the technical as well as the organizational side of the field. This series contains three sub-series including: expository and research monographs, integrative handbooks, and edited volumes, focusing on the state-of-the-art of application domains and/or reference disciplines, as related to information systems.

---

This book on Infectious Disease Informatics (IDI) and biosurveillance is intended to provide an integrated view of the current state of the art, identify technical and policy challenges and opportunities, and promote cross-disciplinary research that takes advantage of novel methodology and what we have learned from innovative applications. This book also fills a systemic gap in the literature by emphasizing informatics driven perspectives (e.g., information system design, data standards, computational aspects of biosurveillance algorithms, and system evaluation). Finally, this book attempts to reach policy makers and practitioners through the clear and effective communication of recent research findings in the context of case studies in IDI and biosurveillance, providing “hands-on” in-depth opportunities to practitioners to increase their understanding of value, applicability, and limitations of technical solutions. This book collects the state of the art research and modern perspectives of distinguished individuals and research groups on cutting-edge IDI technical and policy research and its application in biosurveillance. The contributed chapters are grouped into three units. Unit I provides an overview of recent biosurveillance research while highlighting the relevant legal and policy structures in the context of IDI and biosurveillance ongoing activities. It also identifies IDI data sources while addressing information collection, sharing, and dissemination issues as well as ethical considerations. Unit II contains survey chapters on the types of surveillance methods used to analyze IDI data in the context of public health and bioterrorism. Specific computational techniques covered include: text mining, time series analysis, multiple data streams methods, ensembles of surveillance methods, spatial analysis and visualization, social network analysis, and agent-based simulation. Unit III examines IT and decision support for public health event response and bio-defense. Practical lessons learned in developing public health and biosurveillance systems, technology adoption, and syndromic surveillance for large events are discussed. The goal of this book is to provide an understandable interdisciplinary IDI and biosurveillance reference either used as a standalone textbook or reference for students, researchers, and practitioners in public health, veterinary medicine, biostatistics, information systems, computer science, and public administration and policy. Integrated Series in Information Systems (IS2) strives to publish scholarly work in the technical as well as the organizational side of the field. This series contains three sub-series including: expository and research monographs, integrative handbooks, and edited volumes, focusing on the state-of-the-art of application domains and/or reference disciplines, as related to information systems.

---

This book on Infectious Disease Informatics (IDI) and biosurveillance is intended to provide an integrated view of the current state of the art, identify technical and policy challenges and opportunities, and promote cross-disciplinary research that takes advantage of novel methodology and what we have learned from innovative applications. This book also fills a systemic gap in the literature by emphasizing informatics driven perspectives (e.g., information system design, data standards, computational aspects of biosurveillance algorithms, and system evaluation). Finally, this book attempts to reach policy makers and practitioners through the clear and effective communication of recent research findings in the context of case studies in IDI and biosurveillance, providing “hands-on” in-depth opportunities to practitioners to increase their understanding of value, applicability, and limitations of technical solutions. This book collects the state of the art research and modern perspectives of distinguished individuals and research groups on cutting-edge IDI technical and policy research and its application in biosurveillance. The contributed chapters are grouped into three units. Unit I provides an overview of recent biosurveillance research while highlighting the relevant legal and policy structures in the context of IDI and biosurveillance ongoing activities. It also identifies IDI data sources while addressing information collection, sharing, and dissemination issues as well as ethical considerations. Unit II contains survey chapters on the types of surveillance methods used to analyze IDI data in the context of public health and bioterrorism. Specific computational techniques covered include: text mining, time series analysis, multiple data streams methods, ensembles of surveillance methods, spatial analysis and visualization, social network analysis, and agent-based simulation. Unit III examines IT and decision support for public health event response and bio-defense. Practical lessons learned in developing public health and biosurveillance systems, technology adoption, and syndromic surveillance for large events are discussed. The goal of this book is to provide an understandable interdisciplinary IDI and biosurveillance reference either used as a standalone textbook or reference for students, researchers, and practitioners in public health, veterinary medicine, biostatistics, information systems, computer science, and public administration and policy. Integrated Series in Information Systems (IS2) strives to publish scholarly work in the technical as well as the organizational side of the field. This series contains three sub-series including: expository and research monographs, integrative handbooks, and edited volumes, focusing on the state-of-the-art of application domains and/or reference disciplines, as related to information systems.
Content:
Front Matter....Pages i-li
Front Matter....Pages 1-1
Real-Time Public Health Biosurveillance....Pages 3-22
Designing Ethical Practice in Biosurveillance....Pages 23-44
Using Emergency Department Data For Biosurveillance: The North Carolina Experience....Pages 45-66
Clinical Laboratory Data for Biosurveillance....Pages 67-87
Biosurveillance Based on Test Orders from Veterinary Diagnostic Labs....Pages 89-107
Front Matter....Pages 109-109
Markov Switching Models for Outbreak Detection....Pages 111-144
Detection of Events In Multiple Streams of Surveillance Data....Pages 145-171
Algorithm Combination for Improved Performance in Biosurveillance....Pages 173-189
Modeling in Space and Time....Pages 191-206
Surveillance and Epidemiology of Infectious Diseases using Spatial and Temporal Lustering Methods....Pages 207-234
Age-Adjustment in National Biosurveillance Systems....Pages 235-258
Modeling in Immunization and Biosurveillance Research....Pages 259-278
Natural Language Processing for Biosurveillance....Pages 279-310
Knowledge Mapping for Bioterrorism-Related Literature....Pages 311-338
Social Network Analysis for Contact Tracing....Pages 339-358
Front Matter....Pages 359-359
Multi-Agent Modeling of Biological and Chemical Threats....Pages 361-380
Integrated Health Alerting And Notification....Pages 381-404
Design and Performance of A Public Health Preparedness Informatics Framework....Pages 405-437
System Evaluation and User Technology Adoption....Pages 439-457
Syndromic Surveillance for the G8 Hokkaido Toyako Summit Meeting....Pages 459-477
Back Matter....Pages 479-488

---

This book on Infectious Disease Informatics (IDI) and biosurveillance is intended to provide an integrated view of the current state of the art, identify technical and policy challenges and opportunities, and promote cross-disciplinary research that takes advantage of novel methodology and what we have learned from innovative applications. This book also fills a systemic gap in the literature by emphasizing informatics driven perspectives (e.g., information system design, data standards, computational aspects of biosurveillance algorithms, and system evaluation). Finally, this book attempts to reach policy makers and practitioners through the clear and effective communication of recent research findings in the context of case studies in IDI and biosurveillance, providing “hands-on” in-depth opportunities to practitioners to increase their understanding of value, applicability, and limitations of technical solutions. This book collects the state of the art research and modern perspectives of distinguished individuals and research groups on cutting-edge IDI technical and policy research and its application in biosurveillance. The contributed chapters are grouped into three units. Unit I provides an overview of recent biosurveillance research while highlighting the relevant legal and policy structures in the context of IDI and biosurveillance ongoing activities. It also identifies IDI data sources while addressing information collection, sharing, and dissemination issues as well as ethical considerations. Unit II contains survey chapters on the types of surveillance methods used to analyze IDI data in the context of public health and bioterrorism. Specific computational techniques covered include: text mining, time series analysis, multiple data streams methods, ensembles of surveillance methods, spatial analysis and visualization, social network analysis, and agent-based simulation. Unit III examines IT and decision support for public health event response and bio-defense. Practical lessons learned in developing public health and biosurveillance systems, technology adoption, and syndromic surveillance for large events are discussed. The goal of this book is to provide an understandable interdisciplinary IDI and biosurveillance reference either used as a standalone textbook or reference for students, researchers, and practitioners in public health, veterinary medicine, biostatistics, information systems, computer science, and public administration and policy. Integrated Series in Information Systems (IS2) strives to publish scholarly work in the technical as well as the organizational side of the field. This series contains three sub-series including: expository and research monographs, integrative handbooks, and edited volumes, focusing on the state-of-the-art of application domains and/or reference disciplines, as related to information systems.
Content:
Front Matter....Pages i-li
Front Matter....Pages 1-1
Real-Time Public Health Biosurveillance....Pages 3-22
Designing Ethical Practice in Biosurveillance....Pages 23-44
Using Emergency Department Data For Biosurveillance: The North Carolina Experience....Pages 45-66
Clinical Laboratory Data for Biosurveillance....Pages 67-87
Biosurveillance Based on Test Orders from Veterinary Diagnostic Labs....Pages 89-107
Front Matter....Pages 109-109
Markov Switching Models for Outbreak Detection....Pages 111-144
Detection of Events In Multiple Streams of Surveillance Data....Pages 145-171
Algorithm Combination for Improved Performance in Biosurveillance....Pages 173-189
Modeling in Space and Time....Pages 191-206
Surveillance and Epidemiology of Infectious Diseases using Spatial and Temporal Lustering Methods....Pages 207-234
Age-Adjustment in National Biosurveillance Systems....Pages 235-258
Modeling in Immunization and Biosurveillance Research....Pages 259-278
Natural Language Processing for Biosurveillance....Pages 279-310
Knowledge Mapping for Bioterrorism-Related Literature....Pages 311-338
Social Network Analysis for Contact Tracing....Pages 339-358
Front Matter....Pages 359-359
Multi-Agent Modeling of Biological and Chemical Threats....Pages 361-380
Integrated Health Alerting And Notification....Pages 381-404
Design and Performance of A Public Health Preparedness Informatics Framework....Pages 405-437
System Evaluation and User Technology Adoption....Pages 439-457
Syndromic Surveillance for the G8 Hokkaido Toyako Summit Meeting....Pages 459-477
Back Matter....Pages 479-488
....